HL_4V95_079
3D structure
- PDB id
- 4V95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of YAEJ bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 4V95|1|BA|A|1913, 4V95|1|BA|C|1914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V95_079 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.5991
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4V95|1|BA|G|1910
4V95|1|BA|U|1911
4V95|1|BA|A|1912
4V95|1|BA|A|1913
4V95|1|BA|C|1914
4V95|1|BA|U|1915
4V95|1|BA|A|1916
4V95|1|BA|U|1917
4V95|1|BA|A|1918
4V95|1|BA|A|1919
4V95|1|BA|C|1920
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AV
- Transfer RNA; tRNA
- Chain AY
- YAEJ
Coloring options: