HL_4V97_161

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V97_161 not in the Motif Atlas

Geometric match to HL_4V88_218

Geometric discrepancy: 0.2066

The information below is about HL_4V88_218

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4V97|1|DA|C|543
4V97|1|DA|G|544
4V97|1|DA|C|545
4V97|1|DA|A|547
4V97|1|DA|A|548
4V97|1|DA|G|549

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DN

50S RIBOSOMAL PROTEIN L13

Chain DV

50S RIBOSOMAL PROTEIN L21