HL_4V97_168

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

4V97|1|DA|A|781, 4V97|1|DA|A|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V97_168 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1103

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

4V97|1|DA|U|779
4V97|1|DA|G|780
4V97|1|DA|A|781
4V97|1|DA|A|782
4V97|1|DA|A|783
4V97|1|DA|A|784
4V97|1|DA|G|785

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DD

50S RIBOSOMAL PROTEIN L2