HL_4V97_170

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

4V97|1|DA|A|887

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V97_170 not in the Motif Atlas

Homologous match to HL_9DFE_024

Geometric discrepancy: 0.5501

The information below is about HL_9DFE_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4V97|1|DA|C|884
4V97|1|DA|C|885
4V97|1|DA|C|886
4V97|1|DA|A|887
4V97|1|DA|C|888
4V97|1|DA|C|889
4V97|1|DA|A|890
4V97|1|DA|G|892

Current chains

Chain DA

23S rRNA

Nearby chains

Chain CM

30S ribosomal protein S13

Chain CS

30S ribosomal protein S19