HL_4V9C_009

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

4V9C|1|AA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9C_009 not in the Motif Atlas

Geometric match to HL_6QN3_003

Geometric discrepancy: 0.1513

The information below is about HL_6QN3_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

4V9C|1|AA|C|342
4V9C|1|AA|U|343
4V9C|1|AA|A|344
4V9C|1|AA|C|345
4V9C|1|AA|G|346
4V9C|1|AA|G|347

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain BK

50S ribosomal protein L14

Chain BP

50S ribosomal protein L19