HL_4V9H_032
3D structure
- PDB id
- 4V9H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.86 Å
Loop
- Sequence
- CAGGGUAG
- Length
- 8 nucleotides
- Bulged bases
- 4V9H|1|AV|G|18, 4V9H|1|AV|G|19, 4V9H|1|AV|U|20
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9H_032 not in the Motif Atlas
- Homologous match to HL_4V90_032
- Geometric discrepancy: 0.1337
- The information below is about HL_4V90_032
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.4
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 14
Unit IDs
4V9H|1|AV|C|13
4V9H|1|AV|A|14
4V9H|1|AV|G|15
4V9H|1|AV|G|18
4V9H|1|AV|G|19
4V9H|1|AV|U|20
4V9H|1|AV|A|21
4V9H|1|AV|G|22
Current chains
- Chain AV
- PE hybrid state tRNA Phe
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- 50S ribosomal protein L1
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