HL_4V9I_069

3D structure

PDB id

4V9I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCGAAGACAGCCAGUCGAGU

Length

20 nucleotides

Bulged bases

4V9I|1|BA|A|1091

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9I|1|BA|G|1087
4V9I|1|BA|C|1088
4V9I|1|BA|G|1089
4V9I|1|BA|A|1090
4V9I|1|BA|A|1091
4V9I|1|BA|G|1092
4V9I|1|BA|A|1093
4V9I|1|BA|C|1094
4V9I|1|BA|A|1095
4V9I|1|BA|G|1096
4V9I|1|BA|C|1097
4V9I|1|BA|C|1098
4V9I|1|BA|A|1151
4V9I|1|BA|G|1152
4V9I|1|BA|U|1153
4V9I|1|BA|C|1154
4V9I|1|BA|G|1155
4V9I|1|BA|A|1156
4V9I|1|BA|G|1157
4V9I|1|BA|U|1158

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BH

50S ribosomal protein L6

Chain BJ

50S ribosomal protein L10

Chain BZ

50S ribosomal protein L25