HL_4V9I_177

3D structure

PDB id

4V9I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCCCACCAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9I|1|DA|G|929
4V9I|1|DA|C|930
4V9I|1|DA|C|931
4V9I|1|DA|C|932
4V9I|1|DA|A|933
4V9I|1|DA|C|934
4V9I|1|DA|C|935
4V9I|1|DA|A|936
4V9I|1|DA|G|937
4V9I|1|DA|C|938

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CM

30S Ribosomal protein S13

Chain CS

30S Ribosomal protein S19

Chain CY

A-SITE tRNA