HL_4V9N_034
3D structure
- PDB id
- 4V9N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9N_034 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.0833
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4V9N|1|AW|G|31
4V9N|1|AW|C|32
4V9N|1|AW|U|33
4V9N|1|AW|C|34
4V9N|1|AW|A|35
4V9N|1|AW|U|36
4V9N|1|AW|A|37
4V9N|1|AW|A|38
4V9N|1|AW|C|39
Current chains
- Chain AW
- P-site tRNA-fMet
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AI
- 30S ribosomal protein S9
- Chain AV
- messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')
- Chain AY
- Bacterial peptide chain release factor 2 (RF-2)
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