HL_4V9O_038

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

ACUACGGU

Length

8 nucleotides

Bulged bases

4V9O|1|AA|A|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_038 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3047

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4V9O|1|AA|A|1532
4V9O|1|AA|C|1533
4V9O|1|AA|U|1534
4V9O|1|AA|A|1535
4V9O|1|AA|C|1536
4V9O|1|AA|G|1537
4V9O|1|AA|G|1538
4V9O|1|AA|U|1539

Current chains

Chain AA

23S rRNA

Nearby chains