HL_4V9O_132
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9O_132 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.1167
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
4V9O|1|CA|C|1092
4V9O|1|CA|G|1093
4V9O|1|CA|U|1094
4V9O|1|CA|A|1095
4V9O|1|CA|A|1096
4V9O|1|CA|U|1097
4V9O|1|CA|A|1098
4V9O|1|CA|G|1099
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain C4
- 50S ribosomal protein L36
- Chain CG
- 50S ribosomal protein L6
- Chain CI
- 50S ribosomal protein L11
- Chain DV
- Elongation factor G
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