HL_4V9O_157

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

4V9O|1|CA|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_157 not in the Motif Atlas

Homologous match to HL_4WF9_049

Geometric discrepancy: 0.0941

The information below is about HL_4WF9_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4V9O|1|CA|C|2248
4V9O|1|CA|U|2249
4V9O|1|CA|G|2250
4V9O|1|CA|G|2251
4V9O|1|CA|G|2252
4V9O|1|CA|G|2253
4V9O|1|CA|C|2254
4V9O|1|CA|G|2255
4V9O|1|CA|G|2256

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CM

50S ribosomal protein L16

Chain CW

50S ribosomal protein L27