HL_4V9O_160
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UGCAAUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9O_160 not in the Motif Atlas
- Homologous match to HL_5J7L_189
- Geometric discrepancy: 0.1044
- The information below is about HL_5J7L_189
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
4V9O|1|CA|U|2324
4V9O|1|CA|G|2325
4V9O|1|CA|C|2326
4V9O|1|CA|A|2327
4V9O|1|CA|A|2328
4V9O|1|CA|U|2329
4V9O|1|CA|G|2330
4V9O|1|CA|G|2331
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain CF
- 50S ribosomal protein L5
- Chain CM
- 50S ribosomal protein L16
- Chain CW
- 50S ribosomal protein L27
Coloring options: