HL_4V9O_261

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

4V9O|1|EA|A|2268, 4V9O|1|EA|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_261 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0679

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

4V9O|1|EA|C|2264
4V9O|1|EA|U|2265
4V9O|1|EA|A|2266
4V9O|1|EA|A|2267
4V9O|1|EA|A|2268
4V9O|1|EA|G|2269
4V9O|1|EA|A|2270
4V9O|1|EA|G|2271
4V9O|1|EA|U|2272
4V9O|1|EA|A|2273
4V9O|1|EA|A|2274
4V9O|1|EA|C|2275
4V9O|1|EA|G|2276

Current chains

Chain EA

23S rRNA

Nearby chains

Chain EM

50S ribosomal protein L16

Chain EW

50S ribosomal protein L27