HL_4V9P_132

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

4V9P|1|CA|U|1174, 4V9P|1|CA|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_132 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.28

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

4V9P|1|CA|C|1172
4V9P|1|CA|U|1173
4V9P|1|CA|U|1174
4V9P|1|CA|A|1175
4V9P|1|CA|U|1176
4V9P|1|CA|G|1177

Current chains

Chain CA

23S rRNA

Nearby chains