HL_4V9P_133

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_133 not in the Motif Atlas

Homologous match to HL_5J7L_164

Geometric discrepancy: 0.0684

The information below is about HL_5J7L_164

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4V9P|1|CA|U|1222
4V9P|1|CA|G|1223
4V9P|1|CA|U|1224
4V9P|1|CA|G|1225
4V9P|1|CA|A|1226
4V9P|1|CA|G|1227

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CL

50S ribosomal protein L15

Chain CQ

50S ribosomal protein L20

Chain CR

50S ribosomal protein L21