HL_4V9P_233

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4V9P|1|EA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_233 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.1842

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4V9P|1|EA|C|1064
4V9P|1|EA|U|1065
4V9P|1|EA|U|1066
4V9P|1|EA|A|1067
4V9P|1|EA|G|1068
4V9P|1|EA|A|1069
4V9P|1|EA|A|1070
4V9P|1|EA|G|1071
4V9P|1|EA|C|1072
4V9P|1|EA|A|1073
4V9P|1|EA|G|1074

Current chains

Chain EA

23S rRNA

Nearby chains

Chain EI

50S ribosomal protein L11

Chain EM

50S ribosomal protein L16

Chain FV

elongation factor G