Motif HL_20174.2 Version HL_20174.2 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7OSM_117 | 7OSM | 0.8577 | 0 | ASIT | tRNA | G | 53 | U | 54 | U | 55 | C | 56 | G | 57 | A | 58 | U | 59 | U | 60 | C | 61 | C | 62 | cWW | cWW |
| 2 | HL_1MMS_003 | 1MMS | 0.0000 | 1 | D | LSU rRNA | C | 1064 | U | 1065 | U | 1066 | A | 1067 | G | 1068 | A | 1069 | G | 1071 | C | 1072 | A | 1073 | G | 1074 | cWW | |
| 3 | HL_5D8H_001 | 5D8H | 0.0706 | 1 | A | LSU rRNA | C | 1174 | U | 1175 | U | 1176 | A | 1177 | G | 1178 | A | 1179 | G | 1181 | C | 1182 | A | 1183 | G | 1184 | cWW | |
| 4 | HL_6PRV_001 | 6PRV | 0.0767 | 1 | A | LSU rRNA | C | 1064 | U | 1065 | U | 1066 | A | 1067 | G | 1068 | A | 1069 | G | 1071 | C | 1072 | A | 1073 | G | 1074 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUAGAAGCAG | 3 |
| GUUCGAUUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAGAAGCA | 3 |
| UUCGAUUC | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.07 | Avg 0.36 | Max 0.89
Coloring options: