HL_4V9P_315

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAACCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_315 not in the Motif Atlas

Homologous match to HL_5J7L_140

Geometric discrepancy: 0.1126

The information below is about HL_5J7L_140

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_62934.1

Basepair signature

cWW-tSH-F

Number of instances in this motif group

2

Unit IDs

4V9P|1|GA|C|225
4V9P|1|GA|A|226
4V9P|1|GA|A|227
4V9P|1|GA|C|228
4V9P|1|GA|C|229
4V9P|1|GA|G|230

Current chains

Chain GA

23S rRNA

Nearby chains

Chain GL

50S ribosomal protein L15