Motif HL_62934.1 Version HL_62934.1 of this group appears in releases 3.89 to 3.92
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_140 | 5J7L | 0.0000 | 0 | DA | LSU rRNA | C | 225 | A | 226 | A | 227 | C | 228 | C | 229 | G | 230 | cWW | tSH |
| 2 | HL_8K0K_001 | 8K0K | 0.7513 | 1 | J | RNA (60-MER) | C | 42 | G | 43 | A | 45 | U | 46 | A | 47 | G | 48 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAACCG | 1 |
| CGCAUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACC | 1 |
| GCAUA | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-F
- Heat map statistics
- Min 0.75 | Avg 0.38 | Max 0.75
Coloring options: