Motif HL_62934.1 Version HL_62934.1 of this group appears in releases 3.89 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8K0K_001 | 8K0K | 0.0000 | 2 | J | C | 42 | G | 43 | A | 45 | A | 47 | G | 48 | cWW | tSH |
| 2 | HL_5J7L_140 | 5J7L | 0.7513 | 1 | DA | C | 225 | A | 226 | A | 227 | C | 229 | G | 230 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGCAUAG | 1 |
| CAACCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCAUA | 1 |
| AACC | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-F
- Heat map statistics
- Min 0.75 | Avg 0.38 | Max 0.75
Coloring options: