HL_4V9P_404

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGUCCGGCC

Length

9 nucleotides

Bulged bases

4V9P|1|HA|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_404 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.2892

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4V9P|1|HA|G|1133
4V9P|1|HA|G|1134
4V9P|1|HA|U|1135
4V9P|1|HA|C|1136
4V9P|1|HA|C|1137
4V9P|1|HA|G|1138
4V9P|1|HA|G|1139
4V9P|1|HA|C|1140
4V9P|1|HA|C|1141

Current chains

Chain HA

16S rRNA

Nearby chains

Chain HI

30S ribosomal protein S9