HL_4V9S_052

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAG

Length

4 nucleotides

Bulged bases

4V9S|1|BA|A|572

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9S_052 not in the Motif Atlas

Homologous match to HL_7RQB_017

Geometric discrepancy: 0.1347

The information below is about HL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9S|1|BA|C|568
4V9S|1|BA|G|569
4V9S|1|BA|A|572
4V9S|1|BA|G|573

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain BN

50S Ribosomal Protein L13

Chain BV

50S Ribosomal Protein L21