HL_4W21_067

3D structure

PDB id

4W21 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

4W21|1|5|G|4694, 4W21|1|5|C|4698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70420.7

Basepair signature

cWW-tSH-cWH-tSH-tWH-tHW-tHW-R-R

Number of instances in this motif group

10

Unit IDs

4W21|1|5|C|4688
4W21|1|5|U|4689
4W21|1|5|G|4690
4W21|1|5|A|4691
4W21|1|5|A|4692
4W21|1|5|C|4693
4W21|1|5|G|4694
4W21|1|5|C|4695
4W21|1|5|C|4696
4W21|1|5|U|4697
4W21|1|5|C|4698
4W21|1|5|U|4699
4W21|1|5|A|4700
4W21|1|5|A|4701
4W21|1|5|G|4702

Current chains

Chain 5

28S ribosomal RNA

Nearby chains