RNA 3D Hub //

4W21 Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4W21_0011/5/37:44No text annotation
geometric
HL_4WF9_006
HL_30068.2
HL_4W21_0021/5/68:73No text annotation
geometric
HL_5TBW_002
NA
HL_4W21_0031/5/89:95UNCG variation
geometric
HL_2CZJ_007
NA
HL_4W21_0041/5/131:137No text annotation
geometric
HL_4LFB_004
HL_48417.5
HL_4W21_0051/5/204:211T-loop with 2 stacked bulged bases
geometric
HL_5DH6_002
HL_01609.3
HL_4W21_0061/5/222:226No text annotation
geometric
HL_4WF9_003
HL_75660.5
HL_4W21_0071/5/230:238T-loop with unstacked turn
geometric
HL_7RQB_012
NA
HL_4W21_0081/5/289:298No text annotation
HL_4W21_0091/5/314:323No text annotation
geometric
HL_8P9A_121
HL_77600.2
HL_4W21_0101/5/368:373GNRA
geometric
HL_4V9F_015
HL_37824.7
HL_4W21_0111/5/393:398GNRA
geometric
HL_7RQB_016
NA
HL_4W21_0121/5/1178:1183GNRA
geometric
HL_5J7L_007
HL_37824.7
HL_4W21_0131/5/1252:1258GNRA
geometric
HL_4LFB_012
HL_37824.7
HL_4W21_0141/5/1317:1326T-loop with 2 stacked bulged bases
geometric
HL_5TBW_014
NA
HL_4W21_0151/5/1364:1373No text annotation
HL_4W21_0161/5/1406:1411No text annotation
HL_4W21_0171/5/1436:1448No text annotation
HL_4W21_0181/5/1479:1486No text annotation
HL_4W21_0191/5/1561:1566GNRA
geometric
HL_3LQX_001
HL_37824.7
HL_4W21_0201/5/1593:1602No text annotation
geometric
HL_4V9F_024
HL_88205.2
HL_4W21_0211/5/1627:1635No text annotation
geometric
HL_5TBW_021
NA
HL_4W21_0221/5/1675:1680Externally structured
geometric
HL_5TBW_022
NA
HL_4W21_0231/5/1763:1769GNRA
geometric
HL_3RG5_007
HL_37824.7
HL_4W21_0241/5/1814:1823No text annotation
HL_4W21_0261/5/1886:1893No text annotation
geometric
HL_5TBW_026
NA
HL_4W21_0281/5/2006:2013GNRA wlth tandem sheared
geometric
HL_3HHN_010
HL_81538.2
HL_4W21_0291/5/2130:2244No text annotation
HL_4W21_0301/5/2317:2322GNRA
geometric
HL_2Z75_004
HL_37824.7
HL_4W21_0311/5/2376:2384T-loop with 2 stacked bulged bases
geometric
HL_4WF9_032
HL_28252.8
HL_4W21_0321/5/2420:2426Pseudoknot geometry with 3' bulge
geometric
HL_5TBW_032
NA
HL_4W21_0331/5/2458:2463GNRA variation
geometric
HL_1U6B_004
HL_37824.7
HL_4W21_0341/5/2487:2491No text annotation
geometric
HL_4O26_001
HL_35941.1
HL_4W21_0351/5/2522:2533No text annotation
HL_4W21_0361/5/2558:2569No text annotation
HL_4W21_0371/5/2578:2583GNRA
geometric
HL_5TBW_036
NA
HL_4W21_0381/5/2623:2633No text annotation
HL_4W21_0391/5/2664:2670Mini UNCG
geometric
HL_4YAZ_004
HL_48778.2
HL_4W21_0401/5/2705:2710No text annotation
geometric
HL_4WF9_003
HL_75660.5
HL_4W21_0411/5/2738:2742Mini UNCG
geometric
HL_4L8H_001
HL_48778.2
HL_4W21_0421/5/2792:2799No text annotation
geometric
HL_5TBW_041
NA
HL_4W21_0431/5/2810:2816GNRA
geometric
HL_5TBW_042
NA
HL_4W21_0441/5/2872:2877UNCG
geometric
HL_4PMI_004
HL_34617.5
HL_4W21_0451/5/3614:3618No text annotation
geometric
HL_5TBW_045
NA
HL_4W21_0461/5/3639:3649No text annotation
geometric
HL_4WF9_043
HL_01962.2
HL_4W21_0471/5/3667:3675No text annotation
geometric
HL_6UFM_001
HL_04642.1
HL_4W21_0481/5/3724:3729No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_4W21_0491/5/3757:3767No text annotation
geometric
HL_5TBW_049
NA
HL_4W21_0501/5/3795:3805No text annotation
HL_4W21_0511/5/3873:3882No text annotation
geometric
HL_5TBW_051
NA
HL_4W21_0521/5/3948:4065No text annotation
geometric
HL_5AMQ_001
HL_48417.5
HL_4W21_0531/5/4102:4107UNCG
geometric
HL_4PDB_001
HL_34617.5
HL_4W21_0541/5/4139:4145No text annotation
HL_4W21_0551/5/4193:4201No text annotation
geometric
HL_5TBW_054
NA
HL_4W21_0561/5/4210:4222No text annotation
geometric
HL_5J7L_187
HL_91939.2
HL_4W21_0571/5/4250:4258No text annotation
geometric
HL_5TBW_056
NA
HL_4W21_0581/5/4301:4309No text annotation
geometric
HL_5TBW_058
NA
HL_4W21_0591/5/4321:4326No text annotation
geometric
HL_2ZNI_001
HL_75660.5
HL_4W21_0601/5/4352:4362No text annotation
geometric
HL_4V83_139
NA
HL_4W21_0611/5/4417:4425No text annotation
geometric
HL_5TBW_061
NA
HL_4W21_0621/5/4473:4481No text annotation
geometric
HL_5TBW_070
NA
HL_4W21_0631/5/4495:4505No text annotation
HL_4W21_0641/5/4540:4545GNRA
geometric
HL_6CB3_006
HL_37824.7
HL_4W21_0651/5/4603:4608GNRA
geometric
HL_4R4V_004
HL_37824.7
HL_4W21_0661/5/4644:4653No text annotation
HL_4W21_0671/5/4688:4702No text annotation
geometric
HL_5TBW_067
NA
HL_4W21_0681/5/4907:4914No text annotation
HL_4W21_0691/5/4972:4986No text annotation
HL_4W21_0701/5/5021:5028No text annotation
HL_4W21_0711/7/36:41No text annotation
geometric
HL_5NFV_001
HL_69752.2
HL_4W21_0721/7/86:91GNRA
geometric
HL_5TBW_019
NA
HL_4W21_0731/8/47:56Pseudoknot with intercalation
geometric
HL_4V9F_001
HL_93438.2
HL_4W21_0751/8/107:112No text annotation
HL_4W21_0761/8/121:129No text annotation

Problematic loops

#loop idProblemSequence
HL_4W21_025No text annotation
HL_4W21_027No text annotation
HL_4W21_074No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4W21_0011/5/6:7,
1/8/149:151		Single bulged C
geometric
IL_6ZDP_001
IL_61258.15
IL_4W21_0021/5/12:14,
1/8/143:144		No text annotation
IL_4W21_0031/5/16:18,
1/8/139:141		No text annotation
IL_4W21_0041/5/26:29,
1/5/53:57		No text annotation
IL_4W21_0051/5/30:37,
1/5/44:52		9x8 Sarcin-Ricin; G-bulge
geometric
IL_4WF9_008
IL_84694.2
IL_4W21_0061/5/81:88,
1/5/96:102		8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_006
NA
IL_4W21_0071/5/117:122,
1/5/147:154		No text annotation
IL_4W21_0081/5/124:126,
1/5/142:145		No text annotation
IL_4W21_0091/5/160:161,
1/5/274:276		Single stack bend
geometric
IL_7A0S_054
IL_26793.1
IL_4W21_0111/5/168:173,
1/5/263:267		No text annotation
IL_4W21_0121/5/180:184,
1/5/253:256		No text annotation
geometric
IL_1GID_008
NA
IL_4W21_0131/5/184:189,
1/5/252:253		No text annotation
IL_4W21_0141/5/199:201,
1/5/214:215		Single bulged U
geometric
IL_4V9F_029
IL_89505.4
IL_4W21_0161/5/339:342,
1/8/32:33		Minor groove platform
geometric
IL_7RQB_073
NA
IL_4W21_0171/5/348:350,
1/8/25:26		Single bulged A
geometric
IL_5TBW_013
NA
IL_4W21_0181/5/387:390,
1/5/401:414		No text annotation
geometric
IL_5TBW_014
NA
IL_4W21_0191/5/415:421,
1/8/13:19		Triple sheared with non-canonical cWW
geometric
IL_4V9F_001
IL_04021.2
IL_4W21_0221/5/443:446,
1/5/1300:1304		No text annotation
IL_4W21_0231/5/459:460,
1/5/695:697		Single bulged C
geometric
IL_1KUQ_002
IL_61258.15
IL_4W21_0241/5/462:464,
1/5/691:693		Isolated non-canonical cWW pair
geometric
IL_4AOB_005
IL_87907.2
IL_4W21_0251/5/482:487,
1/5/669:672		No text annotation
IL_4W21_0261/5/487:493,
1/5/661:669		No text annotation
IL_4W21_0271/5/493:496,
1/5/657:661		No text annotation
IL_4W21_0281/5/497:499,
1/5/655:656		No text annotation
IL_4W21_0291/5/500:505,
1/5/653:654		Single stack bend
geometric
IL_4V9F_005
IL_90729.1
IL_4W21_0301/5/508:510,
1/5/649:650		Single bulged A
geometric
IL_1U63_004
IL_31462.6
IL_4W21_0321/5/708:709,
1/5/1287:1289		No text annotation
IL_4W21_0331/5/722:724,
1/5/942:946		No text annotation
IL_4W21_0341/5/726:731,
1/5/938:940		No text annotation
IL_4W21_0351/5/731:735,
1/5/928:938		No text annotation
IL_4W21_0361/5/735:737,
1/5/927:928		Single stack bend
geometric
IL_7A0S_054
IL_26793.1
IL_4W21_0371/5/740:742,
1/5/922:924		Isolated non-canonical cWW pair
geometric
IL_4V88_385
NA
IL_4W21_0381/5/745:750,
1/5/912:919		No text annotation
IL_4W21_0391/5/750:755,
1/5/908:912		No text annotation
IL_4W21_0411/5/1074:1079,
1/5/1221:1236		No text annotation
IL_4W21_0421/5/1081:1082,
1/5/1217:1219		No text annotation
IL_4W21_0431/5/1082:1085,
1/5/1212:1217		No text annotation
IL_4W21_0441/5/1086:1087,
1/5/1209:1211		Single bulged C
geometric
IL_7KGA_001
IL_61258.15
IL_4W21_0451/5/1097:1098,
1/5/1197:1199		No text annotation
IL_4W21_0471/5/1172:1177,
1/5/1184:1189		No text annotation
IL_4W21_0491/5/1357:1361,
1/5/1376:1382		No text annotation
IL_4W21_0501/5/1425:1429,
1/5/1455:1460		No text annotation
IL_4W21_0511/5/1431:1434,
1/5/1450:1453		Double sheared
geometric
IL_4WF9_087
IL_09705.15
IL_4W21_0521/5/1467:1468,
1/5/1496:1498		Single bulged A
geometric
IL_5TBW_024
NA
IL_4W21_0541/5/1474:1478,
1/5/1487:1490		No text annotation
IL_4W21_0551/5/1520:1526,
1/5/1648:1657		No text annotation
IL_4W21_0571/5/1550:1551,
1/5/1576:1578		Single bulged G
geometric
IL_4V9F_026
IL_00225.13
IL_4W21_0581/5/1551:1555,
1/5/1572:1576		Triple sheared
geometric
IL_5TBW_030
NA
IL_4W21_0591/5/1586:1589,
1/5/1605:1607		Major groove platform with extra cWW
geometric
IL_5TBW_031
NA
IL_4W21_0601/5/1590:1592,
1/5/1603:1604		Single bulged U
geometric
IL_5TBW_032
NA
IL_4W21_0611/5/1624:1626,
1/5/1636:1640		Multiple bulged bases
geometric
IL_5J7L_265
IL_06549.2
IL_4W21_0621/5/1672:1674,
1/5/1681:1682		Single stack bend
geometric
IL_4V83_236
IL_90729.1
IL_4W21_0631/5/1686:1688,
1/5/1848:1851		No text annotation
IL_4W21_0651/5/1732:1737,
1/5/1792:1797		5x5 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_7A0S_027
NA
IL_4W21_0661/5/1737:1738,
1/5/1790:1792		Minor groove platform
geometric
IL_6DLR_003
IL_51454.3
IL_4W21_0671/5/1739:1744,
1/5/1786:1789		C-loop
geometric
IL_5TBW_040
NA
IL_4W21_0681/5/1746:1749,
1/5/1781:1784		Tandem non-canonical cWW pairs
geometric
IL_5TBW_041
NA
IL_4W21_0691/5/1749:1751,
1/5/1779:1781		Isolated non-canonical cWW pair
geometric
IL_5TBW_042
NA
IL_4W21_0701/5/1751:1759,
1/5/1773:1779		No text annotation
IL_4W21_0721/5/1761:1763,
1/5/1769:1771		Isolated non-canonical cWW pair
geometric
IL_4V9F_105
IL_87907.2
IL_4W21_0741/5/1858:1860,
1/5/1874:1876		Isolated non-canonical cWW pair
geometric
IL_1U9S_007
IL_87907.2
IL_4W21_0751/5/1861:1863,
1/5/1871:1873		Isolated cWS basepair
geometric
IL_5TBW_047
NA
IL_4W21_0761/5/1905:1909,
1/5/2067:2071		UAA/GAN
geometric
IL_5TBW_048
NA
IL_4W21_0771/5/1911:1918,
1/5/2064:2065		SSU/LSU pseudoknot
geometric
IL_4V9F_038
IL_41203.4
IL_4W21_0781/5/1918:1920,
1/5/2063:2064		No text annotation
IL_4W21_0791/5/1920:1922,
1/5/2062:2063		No text annotation
geometric
IL_8CRE_390
IL_61258.15
IL_4W21_0801/5/1924:1933,
1/5/2053:2060		No text annotation
IL_4W21_0811/5/1933:1944,
1/5/2038:2053		No text annotation
geometric
IL_5TBW_052
NA
IL_4W21_0821/5/1946:1950,
1/5/2033:2036		No text annotation
geometric
IL_6L0Y_002
IL_13404.2
IL_4W21_0831/5/1957:1965,
1/5/2022:2026		Kink-turn
geometric
IL_4V9F_042
IL_99692.2
IL_4W21_0841/5/1973:1977,
1/5/1989:1993		No text annotation
IL_4W21_0851/5/2001:2005,
1/5/2014:2016		Major groove platform with extra cWW
geometric
IL_5D8H_003
IL_51387.2
IL_4W21_0861/5/2083:2085,
1/5/2272:2273		No text annotation
IL_4W21_0871/5/2290:2292,
1/5/2342:2345		No text annotation
IL_4W21_0891/5/2299:2301,
1/5/2334:2335		Single bulged A
geometric
IL_3OXE_001
IL_31462.6
IL_4W21_0901/5/2302:2309,
1/5/2329:2333		Kink-turn
geometric
IL_5J7L_288
IL_70923.9
IL_4W21_0911/5/2310:2314,
1/5/2325:2328		No text annotation
IL_4W21_0921/5/2358:2364,
1/5/3858:3863		No text annotation
geometric
IL_8P9A_289
IL_26307.2
IL_4W21_0931/5/2415:2419,
1/5/2427:2429		C-loop
geometric
IL_7A0S_047
IL_83150.2
IL_4W21_0941/5/2446:2450,
1/5/2509:2514		UAA/GAN
geometric
IL_5TBW_063
NA
IL_4W21_0951/5/2477:2479,
1/5/2499:2500		Single stack bend
geometric
IL_4WF9_007
IL_90729.1
IL_4W21_0961/5/2542:2547,
1/5/2772:2774		Isolated non-canonical cWW pair
geometric
IL_5TBW_145
NA
IL_4W21_0971/5/2589:2593,
1/5/2752:2756		Triple sheared
geometric
IL_7RQB_075
NA
IL_4W21_0991/5/2613:2614,
1/5/2724:2726		No text annotation
IL_4W21_1001/5/2614:2615,
1/5/2722:2724		Single stack bend
geometric
IL_4WF9_007
IL_90729.1
IL_4W21_1011/5/2642:2648,
1/5/2685:2692		No text annotation
IL_4W21_1021/5/2651:2653,
1/5/2681:2682		No text annotation
geometric
IL_8ZA0_002
IL_00225.13
IL_4W21_1031/5/2656:2662,
1/5/2672:2678		No text annotation
IL_4W21_1041/5/2703:2705,
1/5/2710:2713		No text annotation
IL_4W21_1051/5/2832:2838,
1/5/3850:3853		No text annotation
geometric
IL_5TBW_074
NA
IL_4W21_1071/5/2844:2846,
1/5/3842:3844		Isolated tWW turn
geometric
IL_5J7L_305
IL_67095.2
IL_4W21_1081/5/2847:2850,
1/5/3840:3841		Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA
IL_4W21_1091/5/2850:2855,
1/5/3837:3840		Intercalated tWH
geometric
IL_4V9F_062
IL_76758.2
IL_4W21_1101/5/2867:2872,
1/5/2877:2883		tSH-tSH-tHH-tHS
geometric
IL_4V9F_063
IL_47346.2
IL_4W21_1111/5/2889:2891,
1/5/3610:3612		Isolated non-canonical cWW pair
geometric
IL_6OL3_002
IL_87907.2
IL_4W21_1121/5/2894:2897,
1/5/3602:3607		No text annotation
IL_4W21_1131/5/2901:2905,
1/5/3589:3598		No text annotation
IL_4W21_1151/5/3632:3633,
1/5/3827:3829		Single bulged A
geometric
IL_4V9F_064
IL_31462.6
IL_4W21_1171/5/3660:3665,
1/5/3677:3684		Kink-turn related
geometric
IL_5TBW_083
NA
IL_4W21_1181/5/3700:3703,
1/5/3749:3750		Major groove intercalation
geometric
IL_5TBW_084
NA
IL_4W21_1191/5/3704:3705,
1/5/3745:3748		Major groove intercalation
geometric
IL_5TBW_085
NA
IL_4W21_1201/5/3780:3781,
1/5/3811:3814		Bulged stacked bases
geometric
IL_4V9F_070
IL_22551.4
IL_4W21_1211/5/3781:3795,
1/5/3805:3811		No text annotation
IL_4W21_1221/5/3895:3902,
1/5/4558:4565		No text annotation
IL_4W21_1231/5/3913:3915,
1/5/4388:4389		Single bulged U
geometric
IL_5TBW_093
NA
IL_4W21_1241/5/3916:3917,
1/5/4384:4387		Minor groove platform
geometric
IL_5TBW_094
NA
IL_4W21_1251/5/3927:3929,
1/5/4181:4184		Isolated tHS basepair with bulges
geometric
IL_5J7L_325
IL_85599.2
IL_4W21_1271/5/4079:4088,
1/5/4161:4167		No text annotation
IL_4W21_1281/5/4095:4098,
1/5/4111:4113		No text annotation
geometric
IL_4N0T_004
IL_99358.1
IL_4W21_1291/5/4191:4192,
1/5/4202:4204		Single bulged A
geometric
IL_5TBW_098
NA
IL_4W21_1311/5/4239:4243,
1/5/4267:4285		No text annotation
IL_4W21_1321/5/4243:4245,
1/5/4263:4267		Isolated tHS basepair with bulges
geometric
IL_5TBW_099
NA
IL_4W21_1331/5/4291:4293,
1/5/4317:4318		Single bulged A
geometric
IL_4V88_399
NA
IL_4W21_1341/5/4295:4298,
1/5/4312:4315		Tandem non-canonical cWW pairs
geometric
IL_5J7L_283
IL_85033.2
IL_4W21_1351/5/4347:4351,
1/5/4363:4365		No text annotation
geometric
IL_8CRE_417
IL_99358.1
IL_4W21_1361/5/4400:4401,
1/5/4442:4444		No text annotation
IL_4W21_1371/5/4401:4403,
1/5/4440:4442		Isolated non-canonical cWW pair
geometric
IL_5TBW_103
NA
IL_4W21_1381/5/4403:4405,
1/5/4439:4440		Major groove platform
geometric
IL_5TBW_104
NA
IL_4W21_1391/5/4405:4407,
1/5/4435:4439		Major groove minor groove platform with extra cWW
geometric
IL_5TBW_105
NA
IL_4W21_1401/5/4412:4416,
1/5/4426:4430		Triple sheared
geometric
IL_5TBW_106
NA
IL_4W21_1411/5/4453:4454,
1/5/4526:4528		Major groove platform
geometric
IL_4V9F_086
IL_07039.3
IL_4W21_1421/5/4456:4458,
1/5/4520:4524		No text annotation
IL_4W21_1431/5/4458:4459,
1/5/4517:4520		Multiple bulged bases
geometric
IL_5TBW_109
NA
IL_4W21_1441/5/4472:4473,
1/5/4481:4483		No text annotation
IL_4W21_1451/5/4535:4538,
1/5/4547:4551		No text annotation
IL_4W21_1461/5/4577:4579,
1/5/4723:4726		No text annotation
geometric
IL_8CRE_417
IL_99358.1
IL_4W21_1471/5/4579:4582,
1/5/4721:4723		No text annotation
IL_4W21_1481/5/4582:4585,
1/5/4717:4721		Double sheared
geometric
IL_5TBW_114
NA
IL_4W21_1491/5/4590:4592,
1/5/4618:4620		Isolated non-canonical cWW pair
geometric
IL_5ZTM_002
IL_28037.2
IL_4W21_1501/5/4596:4603,
1/5/4608:4614		8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_116
NA
IL_4W21_1511/5/4624:4629,
1/5/4669:4673		No text annotation
IL_4W21_1521/5/4632:4637,
1/5/4662:4666		No text annotation
geometric
IL_8P9A_346
IL_21001.1
IL_4W21_1531/5/4638:4640,
1/5/4659:4661		Isolated cWH basepair
geometric
IL_3R1C_012
IL_10167.6
IL_4W21_1541/5/4641:4642,
1/5/4655:4658		Multiple bulged bases
geometric
IL_1KXK_003
IL_42626.2
IL_4W21_1551/5/4681:4685,
1/5/4705:4709		UAA/GAN
geometric
IL_7RQB_055
NA
IL_4W21_1591/5/4768:4772,
1/5/4863:4866		Tandem non-canonical cWW pairs
geometric
IL_7A0S_040
IL_77658.1
IL_4W21_1601/5/4891:4896,
1/5/4924:4928		No text annotation
IL_4W21_1611/5/4899:4901,
1/5/4920:4921		No text annotation
IL_4W21_1621/5/4992:4994,
1/5/5057:5059		Isolated non-canonical cWW pair
geometric
IL_3D0U_006
IL_87907.2
IL_4W21_1631/5/4996:5000,
1/5/5050:5055		No text annotation
IL_4W21_1641/5/5000:5002,
1/5/5045:5050		No text annotation
IL_4W21_1651/5/5002:5010,
1/5/5038:5045		No text annotation
IL_4W21_1661/5/5012:5014,
1/5/5035:5036		Single bulged C
geometric
IL_4WF9_035
IL_61258.15
IL_4W21_1671/5/5014:5017,
1/5/5032:5035		Double sheared
geometric
IL_4V9F_100
IL_09705.15
IL_4W21_1681/7/15:16,
1/7/62:64		Single bulged C
geometric
IL_3W3S_001
IL_61258.15
IL_4W21_1701/7/21:27,
1/7/52:57		Minor groove platform related
geometric
IL_5TBW_373
NA
IL_4W21_1711/7/28:29,
1/7/48:51		Major groove minor groove platform; mini C-loop
geometric
IL_5J7L_357
IL_68140.4
IL_4W21_1721/7/32:36,
1/7/41:45		Symmetric double minor groove platform
geometric
IL_7RQB_114
NA
IL_4W21_1741/7/71:78,
1/7/98:104		8x7 Sarcin-Ricin; G-bulge
geometric
IL_7A0S_007
IL_04346.10
IL_4W21_1751/7/79:81,
1/7/95:97		Isolated non-canonical cWW pair
geometric
IL_4Y1M_005
IL_07785.1
IL_4W21_1761/7/82:85,
1/7/92:94		Isolated non-canonical cWW pair
geometric
IL_5TBW_378
NA

Problematic loops

#loop idProblemSequence
IL_4W21_031Isolated non-canonical cWW with bulges
IL_4W21_040No text annotation
IL_4W21_157No text annotation
IL_4W21_158No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_4W21_0011/5/112:116,
1/5/155:160,
1/5/276:278		No text annotation
J3_4W21_0021/5/1531:1537,
1/5/1622:1624,
1/5/1640:1643		No text annotation
geometric
J3_5J7L_038
J3_64189.2
J3_4W21_0031/5/1545:1548,
1/5/1580:1584,
1/5/1609:1614		No text annotation
geometric
J3_8P9A_050
J3_21998.1
J3_4W21_0041/5/1969:1971,
1/5/1995:2001,
1/5/2016:2018		No text annotation
geometric
J3_5J7L_040
J3_28621.5
J3_4W21_0051/5/2393:2399,
1/5/2805:2807,
1/5/2819:2822		No text annotation
geometric
J3_8CRE_013
J3_19545.2
J3_4W21_0061/5/2402:2405,
1/5/2785:2792,
1/5/2799:2802		No text annotation
J3_4W21_0071/5/3934:3939,
1/5/4074:4078,
1/5/4168:4176		No text annotation
J3_4W21_0081/5/4091:4095,
1/5/4113:4129,
1/5/4155:4158		No text annotation
J3_4W21_0091/5/4970:4972,
1/5/4986:4991,
1/5/5060:5063		No text annotation

Problematic loops

No problematic loops


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