HL_4W21_074
3D structure
- PDB id
- 4W21 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 4W21|1|8|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19755.1
- Basepair signature
- cWW-cWW-tSH-tHS-R-R-R-R-R-R-cWW-R-R-R-R-R
- Number of instances in this motif group
- 1
Unit IDs
4W21|1|8|G|68
4W21|1|8|U|69
4W21|1|8|G|70
4W21|1|8|A|71
4W21|1|8|A|72
4W21|1|8|U|73
4W21|1|8|U|74
4W21|1|8|G|75
4W21|1|8|C|76
4W21|1|8|A|77
4W21|1|8|G|78
4W21|1|8|G|79
4W21|1|8|A|80
4W21|1|8|C|81
4W21|1|8|A|82
4W21|1|8|C|83
4W21|1|8|A|84
4W21|1|8|U|85
4W21|1|8|U|86
4W21|1|8|G|87
4W21|1|8|A|88
4W21|1|8|U|89
4W21|1|8|C|90
Current chains
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain 5
- 28S ribosomal RNA
Coloring options: