HL_4W29_109
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- 4W29|1|BB|U|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W29_109 not in the Motif Atlas
- Homologous match to HL_7RQB_070
- Geometric discrepancy: 0.2009
- The information below is about HL_7RQB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87939.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4W29|1|BB|C|38
4W29|1|BB|A|39
4W29|1|BB|U|40
4W29|1|BB|U|41
4W29|1|BB|C|42
4W29|1|BB|C|43
4W29|1|BB|G|44
Current chains
- Chain BB
- 5S Ribosomal RNA
Nearby chains
- Chain B4
- 50S ribosomal protein L31
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- 50S ribosomal protein L5
- Chain BS
- 50S ribosomal protein L18
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