HL_4W29_143
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CUCAGUUGGUUAGAG
- Length
- 15 nucleotides
- Bulged bases
- 4W29|1|CW|U|16, 4W29|1|CW|U|17, 4W29|1|CW|G|18, 4W29|1|CW|G|19, 4W29|1|CW|A|21
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W29_143 not in the Motif Atlas
- Homologous match to HL_4LCK_001
- Geometric discrepancy: 0.4994
- The information below is about HL_4LCK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W29|1|CW|C|11
4W29|1|CW|U|12
4W29|1|CW|C|13
4W29|1|CW|A|14
4W29|1|CW|G|15
4W29|1|CW|U|16
4W29|1|CW|U|17
4W29|1|CW|G|18
4W29|1|CW|G|19
4W29|1|CW|U|20
4W29|1|CW|U|20|||A
4W29|1|CW|A|21
4W29|1|CW|G|22
4W29|1|CW|A|23
4W29|1|CW|G|24
Current chains
- Chain CW
- tRNA
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CK
- 30S ribosomal protein S11
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DC
- 50S ribosomal protein L1
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