HL_4W29_178
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W29_178 not in the Motif Atlas
- Homologous match to HL_7RQB_030
- Geometric discrepancy: 0.2914
- The information below is about HL_7RQB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W29|1|DA|C|1092
4W29|1|DA|G|1093
4W29|1|DA|U|1094
4W29|1|DA|A|1095
4W29|1|DA|A|1096
4W29|1|DA|U|1097
4W29|1|DA|A|1098
4W29|1|DA|G|1099
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain CY
- Elongation factor G
- Chain D9
- 50S ribosomal protein L36
- Chain DH
- 50S ribosomal protein L6
- Chain DK
- 50S ribosomal protein L11
Coloring options: