HL_4W29_185
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CCAUGGACGAG
- Length
- 11 nucleotides
- Bulged bases
- 4W29|1|DA|U|1454, 4W29|1|DA|A|1460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W29_185 not in the Motif Atlas
- Homologous match to HL_7A0S_036
- Geometric discrepancy: 0.4836
- The information below is about HL_7A0S_036
- Detailed Annotation
- Pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- HL_93135.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
4W29|1|DA|C|1450
4W29|1|DA|C|1452
4W29|1|DA|A|1453
4W29|1|DA|U|1454
4W29|1|DA|G|1455
4W29|1|DA|G|1456
4W29|1|DA|A|1457
4W29|1|DA|C|1458
4W29|1|DA|G|1459
4W29|1|DA|A|1460
4W29|1|DA|G|1461
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain DR
- 50S ribosomal protein L17
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