3D structure

PDB id
4W2E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CUUAGAAGCAG
Length
11 nucleotides
Bulged bases
4W2E|1|A|A|1070
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4W2E_029 not in the Motif Atlas
Homologous match to HL_6PRV_001
Geometric discrepancy: 0.2606
The information below is about HL_6PRV_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_20174.1
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
5

Unit IDs

4W2E|1|A|C|1064
4W2E|1|A|U|1065
4W2E|1|A|U|1066
4W2E|1|A|A|1067
4W2E|1|A|G|1068
4W2E|1|A|A|1069
4W2E|1|A|A|1070
4W2E|1|A|G|1071
4W2E|1|A|C|1072
4W2E|1|A|A|1073
4W2E|1|A|G|1074

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain K
50S ribosomal protein L11
Chain Q
50S ribosomal protein L16
Chain y
50S ribosomal protein L9, Elongation factor 4

Coloring options:


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