3D structure

PDB id
4W2E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
UGAAGAAG
Length
8 nucleotides
Bulged bases
4W2E|1|A|G|2529
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4W2E_061 not in the Motif Atlas
Homologous match to HL_7RQB_061
Geometric discrepancy: 0.0903
The information below is about HL_7RQB_061
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91104.1
Basepair signature
cWW-F
Number of instances in this motif group
12

Unit IDs

4W2E|1|A|U|2528
4W2E|1|A|G|2529
4W2E|1|A|A|2530
4W2E|1|A|A|2531
4W2E|1|A|G|2532
4W2E|1|A|A|2533
4W2E|1|A|A|2534
4W2E|1|A|G|2535

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 9
50S ribosomal protein L36
Chain H
50S ribosomal protein L6
Chain y
50S ribosomal protein L9, Elongation factor 4

Coloring options:


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