HL_4W2G_005

3D structure

PDB id

4W2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

4W2G|1|AA|U|202, 4W2G|1|AA|U|204

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W2G_005 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.2945

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

4W2G|1|AA|G|200
4W2G|1|AA|C|201
4W2G|1|AA|U|202
4W2G|1|AA|U|203
4W2G|1|AA|U|204
4W2G|1|AA|G|216
4W2G|1|AA|C|217

Current chains

Chain AA

16S Ribosomal RNA

Nearby chains