HL_4W2G_015
3D structure
- PDB id
- 4W2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2G_015 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.073
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4W2G|1|AA|C|689
4W2G|1|AA|G|690
4W2G|1|AA|G|691
4W2G|1|AA|U|692
4W2G|1|AA|G|693
4W2G|1|AA|A|694
4W2G|1|AA|A|695
4W2G|1|AA|A|696
4W2G|1|AA|U|697
4W2G|1|AA|G|698
Current chains
- Chain AA
- 16S Ribosomal RNA
Nearby chains
- Chain AG
- 30S Ribosomal Protein S7
- Chain AK
- 30S Ribosomal Protein S11
- Chain AV
- mRNA
- Chain AY
- Transfer RNA; tRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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