HL_4W2G_172
3D structure
- PDB id
- 4W2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GGUGAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2G_172 not in the Motif Atlas
- Homologous match to HL_7RQB_022
- Geometric discrepancy: 0.0695
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
4W2G|1|DA|G|712
4W2G|1|DA|G|713
4W2G|1|DA|U|714
4W2G|1|DA|G|715
4W2G|1|DA|A|716
4W2G|1|DA|G|717
4W2G|1|DA|A|718
4W2G|1|DA|C|719
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CO
- 30S Ribosomal Protein S15
- Chain CQ
- 30S Ribosomal Protein S17
- Chain DD
- 50S Ribosomal Protein L2
Coloring options: