HL_4W2G_232
3D structure
- PDB id
- 4W2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GACGGAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2G_232 not in the Motif Atlas
- Homologous match to HL_9DFE_198
- Geometric discrepancy: 0.0685
- The information below is about HL_9DFE_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50860.2
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4W2G|1|BA|G|2316
4W2G|1|BA|A|2317
4W2G|1|BA|C|2318
4W2G|1|BA|G|2319
4W2G|1|BA|G|2320
4W2G|1|BA|A|2321
4W2G|1|BA|A|2322
4W2G|1|BA|A|2323
4W2G|1|BA|U|2324
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain BG
- 50S Ribosomal Protein L5
Coloring options: