HL_4W2H_037
3D structure
- PDB id
- 4W2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- UGGCUACCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2H_037 not in the Motif Atlas
- Homologous match to HL_7RQB_001
- Geometric discrepancy: 0.0595
- The information below is about HL_7RQB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99167.2
- Basepair signature
- cWW-F-F-cSH-F-F
- Number of instances in this motif group
- 6
Unit IDs
4W2H|1|BA|U|58
4W2H|1|BA|G|59
4W2H|1|BA|G|60
4W2H|1|BA|C|61
4W2H|1|BA|U|62
4W2H|1|BA|A|63
4W2H|1|BA|C|64
4W2H|1|BA|C|65
4W2H|1|BA|U|66
4W2H|1|BA|G|67
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain B2
- 50S Ribosomal Protein L29
- Chain B7
- 50S Ribosomal Protein L34
- Chain BX
- 50S Ribosomal Protein L23
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