HL_4W2H_083
3D structure
- PDB id
- 4W2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 4W2H|1|BA|A|1935
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2H_083 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1652
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4W2H|1|BA|G|1932
4W2H|1|BA|U|1933
4W2H|1|BA|A|1934
4W2H|1|BA|A|1935
4W2H|1|BA|C|1936
4W2H|1|BA|U|1937
4W2H|1|BA|A|1938
4W2H|1|BA|U|1939
4W2H|1|BA|A|1940
4W2H|1|BA|A|1941
4W2H|1|BA|C|1942
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AV
- mRNA
- Chain AX
- Transfer RNA; tRNA
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