HL_4W2I_188
3D structure
- PDB id
- 4W2I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GCAAAUC
- Length
- 7 nucleotides
- Bulged bases
- 4W2I|1|DA|C|1493, 4W2I|1|DA|U|1497
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2I_188 not in the Motif Atlas
- Homologous match to HL_7RQB_038
- Geometric discrepancy: 0.1053
- The information below is about HL_7RQB_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_46680.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 27
Unit IDs
4W2I|1|DA|G|1492
4W2I|1|DA|C|1493
4W2I|1|DA|A|1494
4W2I|1|DA|A|1495
4W2I|1|DA|A|1496
4W2I|1|DA|U|1497
4W2I|1|DA|C|1498
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain DD
- 50S Ribosomal Protein L2
Coloring options: