HL_4W4G_082

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGAUGAG

Length

7 nucleotides

Bulged bases

4W4G|1|RA|U|1730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W4G_082 not in the Motif Atlas

Homologous match to HL_7RQB_043

Geometric discrepancy: 0.3459

The information below is about HL_7RQB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43656.2

Basepair signature

cWW-tSH

Number of instances in this motif group

8

Unit IDs

4W4G|1|RA|U|1727
4W4G|1|RA|G|1728
4W4G|1|RA|A|1729
4W4G|1|RA|U|1730
4W4G|1|RA|G|1731
4W4G|1|RA|A|1732
4W4G|1|RA|G|1733

Current chains

Chain RA

23S rRNA

Nearby chains