HL_4W4G_141

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

4W4G|1|XA|C|1452, 4W4G|1|XA|G|1453

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W4G_141 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2385

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4W4G|1|XA|C|1449
4W4G|1|XA|U|1450
4W4G|1|XA|A|1451
4W4G|1|XA|C|1452
4W4G|1|XA|G|1453
4W4G|1|XA|G|1454

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20