HL_4W4G_157

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UUGGGAAG

Length

8 nucleotides

Bulged bases

4W4G|1|YA|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W4G_157 not in the Motif Atlas

Homologous match to HL_7RQB_010

Geometric discrepancy: 0.0846

The information below is about HL_7RQB_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

4W4G|1|YA|U|305
4W4G|1|YA|U|306
4W4G|1|YA|G|307
4W4G|1|YA|G|308
4W4G|1|YA|G|309
4W4G|1|YA|A|310
4W4G|1|YA|A|311
4W4G|1|YA|G|312

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YY

50S ribosomal protein L24