HL_4W4G_166

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

4W4G|1|YA|G|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W4G_166 not in the Motif Atlas

Homologous match to HL_7RQB_019

Geometric discrepancy: 0.1404

The information below is about HL_7RQB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32369.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

6

Unit IDs

4W4G|1|YA|C|611
4W4G|1|YA|G|612
4W4G|1|YA|U|613
4W4G|1|YA|U|614
4W4G|1|YA|G|615
4W4G|1|YA|A|616
4W4G|1|YA|G|617

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YF

50S ribosomal protein L4