HL_4W4G_221
3D structure
- PDB id
- 4W4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCAGCCUGGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 4W4G|1|QW|C|16, 4W4G|1|QW|G|18, 4W4G|1|QW|G|19, 4W4G|1|QW|U|20, 4W4G|1|QW|A|21
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W4G_221 not in the Motif Atlas
- Homologous match to HL_4WT8_234
- Geometric discrepancy: 0.468
- The information below is about HL_4WT8_234
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96927.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4W4G|1|QW|G|12
4W4G|1|QW|C|13
4W4G|1|QW|A|14
4W4G|1|QW|G|15
4W4G|1|QW|C|16
4W4G|1|QW|C|17
4W4G|1|QW|U|17|||A
4W4G|1|QW|G|18
4W4G|1|QW|G|19
4W4G|1|QW|U|20
4W4G|1|QW|A|21
4W4G|1|QW|G|22
4W4G|1|QW|C|23
Current chains
- Chain QW
- tRNA fMet
Nearby chains
- Chain QK
- 30S ribosomal protein S11
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
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