HL_4WFA_013

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

AGCACGUGAAAUU

Length

13 nucleotides

Bulged bases

4WFA|1|X|G|432

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFA_013 not in the Motif Atlas

Homologous match to HL_4WF9_013

Geometric discrepancy: 0.0701

The information below is about HL_4WF9_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69139.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4WFA|1|X|A|427
4WFA|1|X|G|428
4WFA|1|X|C|429
4WFA|1|X|A|430
4WFA|1|X|C|431
4WFA|1|X|G|432
4WFA|1|X|U|433
4WFA|1|X|G|434
4WFA|1|X|A|435
4WFA|1|X|A|436
4WFA|1|X|A|437
4WFA|1|X|U|438
4WFA|1|X|U|439

Current chains

Chain X

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L28