HL_4WFA_024

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

GAGAAAUUC

Length

9 nucleotides

Bulged bases

4WFA|1|X|A|826, 4WFA|1|X|U|829

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFA_024 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.1485

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4WFA|1|X|G|823
4WFA|1|X|A|824
4WFA|1|X|G|825
4WFA|1|X|A|826
4WFA|1|X|A|827
4WFA|1|X|A|828
4WFA|1|X|U|829
4WFA|1|X|U|830
4WFA|1|X|C|831

Current chains

Chain X

23S rRNA

Nearby chains

Chain A

50S ribosomal protein L2