HL_4WFA_033

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

GCUCGUC

Length

7 nucleotides

Bulged bases

4WFA|1|X|C|1362, 4WFA|1|X|U|1366

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFA_033 not in the Motif Atlas

Homologous match to HL_7RQB_034

Geometric discrepancy: 0.0843

The information below is about HL_7RQB_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

4WFA|1|X|G|1361
4WFA|1|X|C|1362
4WFA|1|X|U|1363
4WFA|1|X|C|1364
4WFA|1|X|G|1365
4WFA|1|X|U|1366
4WFA|1|X|C|1367

Current chains

Chain X

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L17

Chain P

50S ribosomal protein L22