HL_4WFA_047

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

4WFA|1|X|A|2057, 4WFA|1|X|A|2058, 4WFA|1|X|G|2059

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFA_047 not in the Motif Atlas

Homologous match to HL_4WF9_047

Geometric discrepancy: 0.0594

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78372.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

10

Unit IDs

4WFA|1|X|G|2054
4WFA|1|X|U|2055
4WFA|1|X|G|2056
4WFA|1|X|A|2057
4WFA|1|X|A|2058
4WFA|1|X|G|2059
4WFA|1|X|A|2060
4WFA|1|X|U|2061
4WFA|1|X|G|2062
4WFA|1|X|C|2063

Current chains

Chain X

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain O

50S ribosomal protein L21

Chain Z

50S ribosomal protein L32