HL_4WOI_164
3D structure
- PDB id
- 4WOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGAAUGGAAG
- Length
- 10 nucleotides
- Bulged bases
- 4WOI|1|CA|A|2406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WOI_164 not in the Motif Atlas
- Homologous match to HL_5J7L_192
- Geometric discrepancy: 0.0994
- The information below is about HL_5J7L_192
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53454.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4WOI|1|CA|U|2404
4WOI|1|CA|G|2405
4WOI|1|CA|A|2406
4WOI|1|CA|A|2407
4WOI|1|CA|U|2408
4WOI|1|CA|G|2409
4WOI|1|CA|G|2410
4WOI|1|CA|A|2411
4WOI|1|CA|A|2412
4WOI|1|CA|G|2413
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain CL
- 50S ribosomal protein L15
Coloring options: