HL_4WOI_191
3D structure
- PDB id
- 4WOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WOI_191 not in the Motif Atlas
- Homologous match to HL_5J7L_015
- Geometric discrepancy: 0.0775
- The information below is about HL_5J7L_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4WOI|1|DA|C|689
4WOI|1|DA|G|690
4WOI|1|DA|G|691
4WOI|1|DA|U|692
4WOI|1|DA|G|693
4WOI|1|DA|A|694
4WOI|1|DA|A|695
4WOI|1|DA|A|696
4WOI|1|DA|U|697
4WOI|1|DA|G|698
Current chains
- Chain DA
- 16S ribosomal RNA
Nearby chains
- Chain CA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DG
- 30S ribosomal protein S7
- Chain DK
- 30S ribosomal protein S11
- Chain DV
- Messenger RNA
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