HL_4WPO_018

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

4WPO|1|AA|G|639

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_018 not in the Motif Atlas

Homologous match to HL_7RQB_019

Geometric discrepancy: 0.0645

The information below is about HL_7RQB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32369.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

6

Unit IDs

4WPO|1|AA|C|635
4WPO|1|AA|G|636
4WPO|1|AA|U|637
4WPO|1|AA|U|638
4WPO|1|AA|G|639
4WPO|1|AA|A|640
4WPO|1|AA|G|641

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AF

50S ribosomal protein L4